ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1joeB1 - ECOD Domain | ECOD

ECOD/Domains/e1joeB1

e1joeB1

UID: 000067149

PDB

Range: B:9-156
PDB: 1JOE chain B(all domains)
UniProt: P44007 (all domains)
Gene: luxS

Molecule: AUTOINDUCER-2 PRODUCTION PROTEIN

3D Structure

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Related Domains

Browse other domains in LuxS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyLuxS(309.1.1.3)

Ligands

in contact, ≤ 4 Å

MERCURY (II) IONHG
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

S-Ribosylhomocysteinase (LuxS)

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 1JOE RCSB PDB: 1JOE PDBe: 1JOE UniProt: P44007

Downloads

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