ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vm6A1 - ECOD Domain | ECOD

ECOD/Domains/e1vm6A1

e1vm6A1

UID: 000006762

RepresentativePDB

Range: A:97-182
PDB: 1VM6 chain A(all domains)
UniProt: Q9X1K8 (all domains)
Gene: dapB

Molecule: Dihydrodipicolinate reductase

3D Structure

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Related Domains

Browse other domains in DapB_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyDapB_C(298.1.1.9)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

Dihydrodipicolinate reductase, C-terminus

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 1VM6 RCSB PDB: 1VM6 PDBe: 1VM6 UniProt: Q9X1K8

Downloads

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Drug annotations from DrugDomain.