ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1omsB1 - ECOD Domain | ECOD

ECOD/Domains/e1omsB1

e1omsB1

UID: 000068060

PDB

Range: B:1-116
PDB: 1OMS chain B(all domains)
UniProt: P0A850 (all domains)
Gene: tig

Molecule: Trigger Factor

3D Structure

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Related Domains

Browse other domains in Trigger_N →

Classification

AArchitecturea+b two layers(a.11)

XX-groupGlucose permease domain IIB-like(306)

HH-groupTrigger factor ribosome-binding domain(306.7)

TT-groupTrigger factor ribosome-binding domain(306.7.1)

FFamilyTrigger_N(306.7.1.1)

Ligands

in contact, ≤ 4 Å

Sulfur dioxideSO2
drugDrugBank DB16426

+ 2 additives (Sulfate ion, Tetraethylene glycol)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF05697Trigger_N

Bacterial trigger factor protein (TF)

External Links

ECOD PDB View: 1OMS RCSB PDB: 1OMS PDBe: 1OMS UniProt: P0A850

Downloads

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Tetraethylene glycol

Shown in the structure viewer. Drug annotations from DrugDomain.