ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3d1mB1 - ECOD Domain | ECOD

ECOD/Domains/e3d1mB1

e3d1mB1

UID: 000068075

PDB

Range: B:41-188
PDB: 3D1M chain B(all domains)
UniProt: Q62226 (all domains)
Gene: Shh

Molecule: Sonic hedgehog protein

3D Structure

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Related Domains

Browse other domains in HH_signal →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHedgehog/DD-peptidase(307)

HH-groupHedgehog/DD-peptidase(307.1)

TT-groupHedgehog/DD-peptidase(307.1.1)

FFamilyHH_signal(307.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01085HH_signal

Hedgehog amino-terminal signalling domain

ClanCL0170Peptidase_MD

External Links

ECOD PDB View: 3D1M RCSB PDB: 3D1M PDBe: 3D1M UniProt: Q62226

Downloads

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