ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2degE1 - ECOD Domain | ECOD

ECOD/Domains/e2degE1

e2degE1

UID: 000068176

PDB

Range: E:2-67
PDB: 2DEG chain E(all domains)
UniProt: Q5SIE3 (all domains)
Gene: TTHA1431

Molecule: tt0972 protein

3D Structure

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Related Domains

Browse other domains in Dodecin →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDodecin subunit-like(872)

HH-groupFlavin-binding protein dodecin-like(872.1)

TT-groupFlavin-binding protein dodecin-like(872.1.1)

FFamilyDodecin(872.1.1.2)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462within 5 Å only

Shown in the structure viewer.

Pfam Families

PF07311Dodecin

Dodecin

ClanCL0319SHS2

External Links

ECOD PDB View: 2DEG RCSB PDB: 2DEG PDBe: 2DEG UniProt: Q5SIE3

Downloads

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Drug annotations from DrugDomain.