ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jmsA3 - ECOD Domain | ECOD

ECOD/Domains/e1jmsA3

e1jmsA3

UID: 000006818

RepresentativePDB

Range: A:303-510
PDB: 1JMS chain A(all domains)
UniProt: P09838 (all domains)
Gene: Dntt

Molecule: TERMINAL DEOXYNUCLEOTIDYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in NTP_transf_2,DNA_pol_B_thumb →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyNTP_transf_2,DNA_pol_B_thumb(316.1.1.4)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01909NTP_transf_2

Nucleotidyltransferase domain

ClanCL0260NTP_transf

PF14791DNA_pol_B_thumb

DNA polymerase beta thumb

External Links

ECOD PDB View: 1JMS RCSB PDB: 1JMS PDBe: 1JMS UniProt: P09838

Downloads

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