ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ifqA1 - ECOD Domain | ECOD

ECOD/Domains/e1ifqA1

e1ifqA1

UID: 000006872

RepresentativePDB

Range: A:1-127
PDB: 1IFQ chain A(all domains)
UniProt: O08547 (all domains)
Gene: Sec22b

Molecule: vesicle trafficking protein Sec22b

3D Structure

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Related Domains

Browse other domains in Longin →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupprofilin-like(223.2)

TT-groupprofilin-like(223.2.1)

FFamilyLongin(223.2.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Regulated-SNARE-like domain

ClanCL0431PF

External Links

ECOD PDB View: 1IFQ RCSB PDB: 1IFQ PDBe: 1IFQ UniProt: O08547

Downloads

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