ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ojrA1 - ECOD Domain | ECOD

ECOD/Domains/e1ojrA1

e1ojrA1

UID: 000006939

RepresentativePDB

Range: A:1-274
PDB: 1OJR chain A(all domains)
UniProt: P32169 (all domains)
Gene: rhaD

Molecule: RHAMNULOSE-1-PHOSPHATE ALDOLASE

3D Structure

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Related Domains

Browse other domains in Aldolase_II →

Classification

AArchitecturea+b three layers(a.12)

XX-groupAraD-like aldolase/epimerase(281)

HH-groupAraD-like aldolase/epimerase(281.1)

TT-groupAraD-like aldolase/epimerase(281.1.1)

FFamilyAldolase_II(281.1.1.1)

Ligands

in contact, ≤ 4 Å

Dihydroxyacetone2HA
drugDrugBank DB01775
Zinc ionZN
metal

+ 3 additives (1,4-Dioxane, Glycerin, Phosphate ion)

Pfam Families

PF00596Aldolase_II

Class II Aldolase and Adducin N-terminal domain

ClanCL0898AraD-like

External Links

ECOD PDB View: 1OJR RCSB PDB: 1OJR PDBe: 1OJR UniProt: P32169

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,4-Dioxane

DrugBank DB03316

GlycerinGOL

DrugBank DB09462

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.