ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ohtA1 - ECOD Domain | ECOD

ECOD/Domains/e1ohtA1

e1ohtA1

UID: 000006945

RepresentativePDB

Range: A:12-185
PDB: 1OHT chain A(all domains)
UniProt: Q8INK6 (all domains)
Gene: PGRP-LB

Molecule: CG14704 PROTEIN

3D Structure

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Related Domains

Browse other domains in Amidase_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupN-acetylmuramoyl-L-alanine amidase-like(285)

HH-groupN-acetylmuramoyl-L-alanine amidase-like(285.1)

TT-groupN-acetylmuramoyl-L-alanine amidase-like(285.1.1)

FFamilyAmidase_2(285.1.1.1)

Ligands

in contact, ≤ 4 Å

L-tartaric acidTLA
drugDrugBank DB09459
Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF01510Amidase_2

N-acetylmuramoyl-L-alanine amidase

External Links

ECOD PDB View: 1OHT RCSB PDB: 1OHT PDBe: 1OHT UniProt: Q8INK6

Downloads

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1,2-ETHANEDIOL

Shown in the structure viewer. Drug annotations from DrugDomain.