ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1b8aA2 - ECOD Domain | ECOD

ECOD/Domains/e1b8aA2

e1b8aA2

UID: 000007014

RepresentativePDB

Range: A:104-438
PDB: 1B8A chain A(all domains)
UniProt: Q52428 (all domains)
Gene: aspS

Molecule: PROTEIN (ASPARTYL-TRNA SYNTHETASE)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_2 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupClass II aaRS and biotin synthetases(314)

HH-groupClass II aaRS and biotin synthetases(314.1)

TT-groupClass II aaRS and biotin synthetases(314.1.1)

FFamilytRNA-synt_2(314.1.1.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00152tRNA-synt_2

tRNA synthetases class II (D, K and N)

ClanCL0040tRNA_synt_II

External Links

ECOD PDB View: 1B8A RCSB PDB: 1B8A PDBe: 1B8A UniProt: Q52428

Downloads

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