ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pg3B2 - ECOD Domain | ECOD

ECOD/Domains/e1pg3B2

e1pg3B2

UID: 000070675

PDB

Range: B:515-622
PDB: 1PG3 chain B(all domains)
UniProt: Q8ZKF6 (all domains)
Gene: acs

Molecule: acetyl-CoA synthetase

3D Structure

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Related Domains

Browse other domains in AMP-binding_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyAMP-binding_C(327.5.1.2)

Ligands

in contact, ≤ 4 Å

Coenzyme ACOA
drugDrugBank DB01992
Adenosine-5'-PropylphosphatePRX
drugDrugBank DB03230

Pfam Families

PF13193AMP-binding_C

AMP-binding enzyme C-terminal domain

ClanCL0531AMP-binding_C

External Links

ECOD PDB View: 1PG3 RCSB PDB: 1PG3 PDBe: 1PG3 UniProt: Q8ZKF6

Downloads

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Magnesium ion

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.