ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qdnA2 - ECOD Domain | ECOD

ECOD/Domains/e1qdnA2

e1qdnA2

UID: 000071101

PDB

Range: A:86-201
PDB: 1QDN chain A(all domains)
UniProt: P18708 (all domains)
Gene: NSF

Molecule: PROTEIN (N-ETHYLMALEIMIDE SENSITIVE FUSION PROTEIN (NSF))

3D Structure

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Related Domains

Browse other domains in CDC48_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCdc48 domain 2-like(229)

HH-groupCdc48 domain 2-like(229.1)

TT-groupCdc48 domain 2-like(229.1.1)

FFamilyCDC48_2(229.1.1.1)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02933CDC48_2

Cell division protein 48 (CDC48), domain 2

ClanCL0402Cdc48_2-like

External Links

ECOD PDB View: 1QDN RCSB PDB: 1QDN PDBe: 1QDN UniProt: P18708

Downloads

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