ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1p16A2 - ECOD Domain | ECOD

ECOD/Domains/e1p16A2

e1p16A2

UID: 000007119

RepresentativePDB

Range: A:1-245
PDB: 1P16 chain A(all domains)
UniProt: P78587 (all domains)
Gene: CGT1

Molecule: mRNA capping enzyme alpha subunit

3D Structure

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Related Domains

Browse other domains in mRNA_cap_enzyme →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilymRNA_cap_enzyme(206.1.3.4)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-Monophosphate5GP
drugDrugBank DB01972within 5 Å only

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Pfam Families

PF01331mRNA_cap_enzyme

mRNA capping enzyme, catalytic domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 1P16 RCSB PDB: 1P16 PDBe: 1P16 UniProt: P78587

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.