ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1rmgA1 - ECOD Domain | ECOD

ECOD/Domains/e1rmgA1

e1rmgA1

UID: 000007214

RepresentativePDB

Range: A:1-422
PDB: 1RMG chain A(all domains)
UniProt: Q00001 (all domains)
Gene: rhgA

Molecule: RHAMNOGALACTURONASE A

3D Structure

Loading viewer...

Related Domains

Browse other domains in Glyco_hydro_28 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyGlyco_hydro_28(207.2.1.1)

Ligands

in contact, ≤ 4 Å

beta-D-mannopyranoseBMA
alpha-D-glucopyranoseGLC
alpha-D-mannopyranoseMAN

Shown in the structure viewer.

Pfam Families

PF00295Glyco_hydro_28

Glycosyl hydrolases family 28

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 1RMG RCSB PDB: 1RMG PDBe: 1RMG UniProt: Q00001

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.