ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2a8tB1 - ECOD Domain | ECOD

ECOD/Domains/e2a8tB1

e2a8tB1

UID: 000072747

PDB

Range: B:18-208
PDB: 2A8T chain B(all domains)
UniProt: Q6TEC1 (all domains)
Gene: nudt16

Molecule: U8 snoRNA-binding protein X29

3D Structure

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Related Domains

Browse other domains in Nudt16-like →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNudt16-like(221.4.1.13)

Ligands

in contact, ≤ 4 Å

7-Methyl-7,8-dihydroguanosine 5'-(tetrahydrogen triphosphate)MGT
drugDrugBank DB03358
AdenosineADN
drugDrugBank DB00640within 5 Å only

Pfam Families

PF22327Nudt16-like

U8 snoRNA-decapping enzyme-like

ClanCL0261NUDIX

External Links

ECOD PDB View: 2A8T RCSB PDB: 2A8T PDBe: 2A8T UniProt: Q6TEC1

Downloads

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MANGANESE (II) IONMN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.