ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1e42B2 - ECOD Domain | ECOD

ECOD/Domains/e1e42B2

e1e42B2

UID: 000073563

PDB

Range: B:825-937
PDB: 1E42 chain B(all domains)
UniProt: P63010 (all domains)
Gene: AP2B1

Molecule: AP-2 COMPLEX SUBUNIT BETA

3D Structure

Loading viewer...

Related Domains

Browse other domains in B2-adapt-app_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupSubdomain of clathrin and coatomer appendage domain(331.9)

TT-groupSubdomain of clathrin and coatomer appendage domain(331.9.1)

FFamilyB2-adapt-app_C(331.9.1.2)

Ligands

in contact, ≤ 4 Å

(4R,5R)-1,2-dithiane-4,5-diolDTD
drugDrugBank DB01822
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Pfam Families

PF09066B2-adapt-app_C

Beta2-adaptin appendage, C-terminal sub-domain

ClanCL0545APCOP-app_sub

External Links

ECOD PDB View: 1E42 RCSB PDB: 1E42 PDBe: 1E42 UniProt: P63010

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.