ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jl0B1 - ECOD Domain | ECOD

ECOD/Domains/e1jl0B1

e1jl0B1

UID: 000073577

PDB

Range: B:5-329
PDB: 1JL0 chain B(all domains)
UniProt: P17707 (all domains)
Gene: AMD1

Molecule: S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME

3D Structure

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Related Domains

Browse other domains in SAM_decarbox →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupS-adenosylmethionine decarboxylase-related(331.10)

TT-groupS-adenosylmethionine decarboxylase(331.10.1)

FFamilySAM_decarbox(331.10.1.1)

Ligands

in contact, ≤ 4 Å

PutrescinePUT
drugDrugBank DB01917

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer.

Pfam Families

PF01536SAM_decarbox

Adenosylmethionine decarboxylase

External Links

ECOD PDB View: 1JL0 RCSB PDB: 1JL0 PDBe: 1JL0 UniProt: P17707

Downloads

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Drug annotations from DrugDomain.