ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1j4gB1 - ECOD Domain | ECOD

ECOD/Domains/e1j4gB1

e1j4gB1

UID: 000074313

PDB

Range: B:1-240
PDB: 1J4G chain B(all domains)
UniProt: P09989 (all domains)

Molecule: Trichosanthin delta C7

3D Structure

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Related Domains

Browse other domains in RIP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRIP/Polo-box domain(292)

HH-groupRibosome inactivating proteins (RIP)(292.1)

TT-groupRibosome inactivating proteins (RIP)(292.1.1)

FFamilyRIP(292.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ribosome inactivating protein

External Links

ECOD PDB View: 1J4G RCSB PDB: 1J4G PDBe: 1J4G UniProt: P09989

Downloads

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