ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1j1sA1 - ECOD Domain | ECOD

ECOD/Domains/e1j1sA1

e1j1sA1

UID: 000074348

PDB

Range: A:1-261
PDB: 1J1S chain A(all domains)
UniProt: P23339 (all domains)

Molecule: Antiviral Protein S

3D Structure

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Related Domains

Browse other domains in RIP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRIP/Polo-box domain(292)

HH-groupRibosome inactivating proteins (RIP)(292.1)

TT-groupRibosome inactivating proteins (RIP)(292.1.1)

FFamilyRIP(292.1.1.1)

Ligands

in contact, ≤ 4 Å

Formycin-5'-MonophosphateFMP
drugDrugBank DB03464
N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer.

Pfam Families

Ribosome inactivating protein

External Links

ECOD PDB View: 1J1S RCSB PDB: 1J1S PDBe: 1J1S UniProt: P23339

Downloads

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Drug annotations from DrugDomain.