ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1e3dD3 - ECOD Domain | ECOD

ECOD/Domains/e1e3dD3

e1e3dD3

UID: 000077042

PDB

Range: D:9-48,D:501-541
PDB: 1E3D chain D(all domains)
UniProt: Q9L868 (all domains)

Molecule: [NiFe] hydrogenase large subunit

3D Structure

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Related Domains

Browse other domains in NiFeSe_Hases, HoxH →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4)

TT-groupNi-Fe binding domain in nickel-iron hydrogenase large subunit(244.4.1)

FFamilyNiFeSe_Hases, HoxH(244.4.1.3)

Ligands

in contact, ≤ 4 Å

(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS,S)NICKEL(II)](FE-NI)FNE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00374NiFeSe_Hases

Nickel-dependent hydrogenase

HoxL-like

External Links

ECOD PDB View: 1E3D RCSB PDB: 1E3D PDBe: 1E3D UniProt: Q9L868

Downloads

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