ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1e5qE1 - ECOD Domain | ECOD

ECOD/Domains/e1e5qE1

e1e5qE1

UID: 000077401

PDB

Range: E:125-391
PDB: 1E5Q chain E(all domains)
UniProt: Q9P4R4 (all domains)
Gene: LYS3

Molecule: Saccharopine dehydrogenase [NADP(+), L-glutamate-forming]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sacchrp_dh_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilySacchrp_dh_C(298.1.1.15)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338
L-SaccharopineSHR
drugDrugBank DB04207

Shown in the structure viewer.

Pfam Families

PF16653Sacchrp_dh_C

Saccharopine dehydrogenase C-terminal domain

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 1E5Q RCSB PDB: 1E5Q PDBe: 1E5Q UniProt: Q9P4R4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.