ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dapB1 - ECOD Domain | ECOD

ECOD/Domains/e1dapB1

e1dapB1

UID: 000077407

PDB

Range: B:119-268
PDB: 1DAP chain B(all domains)
UniProt: P04964 (all domains)
Gene: ddh

Molecule: DIAMINOPIMELIC ACID DEHYDROGENASE

3D Structure

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Related Domains

Browse other domains in DAPDH_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyDAPDH_C(298.1.1.16)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

PF16654DAPDH_C

Diaminopimelic acid dehydrogenase C-terminal domain

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 1DAP RCSB PDB: 1DAP PDBe: 1DAP UniProt: P04964

Downloads

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Drug annotations from DrugDomain.