ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1avmB2 - ECOD Domain | ECOD

ECOD/Domains/e1avmB2

e1avmB2

UID: 000077678

PDB

Range: B:89-201
PDB: 1AVM chain B(all domains)
UniProt: P80293 (all domains)
Gene: sodA

Molecule: SUPEROXIDE DISMUTASE

3D Structure

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Related Domains

Browse other domains in Sod_Fe_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupFe,Mn superoxide dismutase (SOD)-C(228)

HH-groupFe,Mn superoxide dismutase (SOD)-C(228.1)

TT-groupFe,Mn superoxide dismutase (SOD)-C(228.1.1)

FFamilySod_Fe_C(228.1.1.1)

Ligands

in contact, ≤ 4 Å

Azide ionAZI
FE (III) IONFE
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02777Sod_Fe_C

Iron/manganese superoxide dismutases, C-terminal domain

External Links

ECOD PDB View: 1AVM RCSB PDB: 1AVM PDBe: 1AVM UniProt: P80293

Downloads

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