ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ln0B1 - ECOD Domain | ECOD

ECOD/Domains/e1ln0B1

e1ln0B1

UID: 000077927

PDB

Range: B:1-94
PDB: 1LN0 chain B(all domains)
UniProt: P13299 (all domains)
Gene: ITEVIR

Molecule: intron-associated endonuclease 1

3D Structure

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Related Domains

Browse other domains in GIY-YIG →

Classification

AArchitecturea+b three layers(a.12)

XX-groupGIY-YIG endonuclease(821)

HH-groupGIY-YIG endonuclease(821.1)

TT-groupGIY-YIG endonuclease(821.1.1)

FFamilyGIY-YIG(821.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01541GIY-YIG

GIY-YIG catalytic domain

ClanCL0418GIY-YIG

External Links

ECOD PDB View: 1LN0 RCSB PDB: 1LN0 PDBe: 1LN0 UniProt: P13299

Downloads

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