ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2c6wB2 - ECOD Domain | ECOD

ECOD/Domains/e2c6wB2

e2c6wB2

UID: 000078743

PDB

Range: B:267-365,B:470-649
PDB: 2C6W chain B(all domains)
UniProt: Q8DR59 (all domains)
Gene: pbpA

Molecule: PENICILLIN-BINDING PROTEIN 1A

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 2C6W RCSB PDB: 2C6W PDBe: 2C6W UniProt: Q8DR59

Downloads

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