ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2a40B1 - ECOD Domain | ECOD

ECOD/Domains/e2a40B1

e2a40B1

UID: 000007880

RepresentativePDB

Range: B:1-260
PDB: 2A40 chain B(all domains)
UniProt: P00639 (all domains)
Gene: DNASE1

Molecule: Deoxyribonuclease-1

3D Structure

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Related Domains

Browse other domains in Exo_endo_phos →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCarbon-nitrogen hydrolase-like(246)

HH-groupDNase I-like(246.3)

TT-groupDNase I-like(246.3.1)

FFamilyExo_endo_phos(246.3.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Magnesium ionMG
metal

+ 1 additive (Glycerin)

Glycerin

Pfam Families

PF03372Exo_endo_phos

Endonuclease/Exonuclease/phosphatase family

ClanCL0530DNase_I-like

External Links

ECOD PDB View: 2A40 RCSB PDB: 2A40 PDBe: 2A40 UniProt: P00639

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.