ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vlrB2 - ECOD Domain | ECOD

ECOD/Domains/e1vlrB2

e1vlrB2

UID: 000078893

PDB

Range: B:146-337
PDB: 1VLR chain B(all domains)
UniProt: Q9DAR7 (all domains)
Gene: Dcps

Molecule: mRNA decapping enzyme

3D Structure

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Related Domains

Browse other domains in DcpS_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupHIT-like(312)

HH-groupHIT-related(312.1)

TT-groupHIT-related(312.1.1)

FFamilyDcpS_C(312.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Scavenger mRNA decapping enzyme C-term binding

ClanCL0265HIT

External Links

ECOD PDB View: 1VLR RCSB PDB: 1VLR PDBe: 1VLR UniProt: Q9DAR7

Downloads

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