ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m2xA1 - ECOD Domain | ECOD

ECOD/Domains/e1m2xA1

e1m2xA1

UID: 000007893

RepresentativePDB

Range: A:41-297
PDB: 1M2X chain A(all domains)
UniProt: O08498 (all domains)
Gene: blaB1

Molecule: class B carbapenemase BlaB-1

3D Structure

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Related Domains

Browse other domains in Lactamase_B →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B(247.1.1.1)

Ligands

in contact, ≤ 4 Å

EpicaptoprilMCO
drugDrugBank DB02032
Sodium ionNA
metal
Zinc ionZN

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 1M2X RCSB PDB: 1M2X PDBe: 1M2X UniProt: O08498

Downloads

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metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.