ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xtoA1 - ECOD Domain | ECOD

ECOD/Domains/e1xtoA1

e1xtoA1

UID: 000007902

RepresentativePDB

Range: A:1-304
PDB: 1XTO chain A(all domains)
UniProt: Q88QV5 (all domains)
Gene: pqqB

Molecule: Coenzyme PQQ synthesis protein B

3D Structure

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Related Domains

Browse other domains in Lactamase_B_2 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B_2(247.1.1.11)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12706Lactamase_B_2

Beta-lactamase superfamily domain

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 1XTO RCSB PDB: 1XTO PDBe: 1XTO UniProt: Q88QV5

Downloads

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