ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1t8hA1 - ECOD Domain | ECOD

ECOD/Domains/e1t8hA1

e1t8hA1

UID: 000007916

RepresentativePDB

Range: A:1-272
PDB: 1T8H chain A(all domains)
UniProt: P84138 (all domains)
Gene: ylmD

Molecule: YlmD protein sequence homologue

3D Structure

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Related Domains

Browse other domains in Cu-oxidase_4 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupCNF1/YfiH-like putative cysteine hydrolases(288)

HH-groupCNF1/YfiH-like putative cysteine hydrolases(288.1)

TT-groupCNF1/YfiH-like putative cysteine hydrolases(288.1.1)

FFamilyCu-oxidase_4(288.1.1.1)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02578Cu-oxidase_4

Multi-copper polyphenol oxidoreductase laccase

ClanCL0663CNF1_YfiH

External Links

ECOD PDB View: 1T8H RCSB PDB: 1T8H PDBe: 1T8H UniProt: P84138

Downloads

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