ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yyeB2 - ECOD Domain | ECOD

ECOD/Domains/e2yyeB2

e2yyeB2

UID: 000079169

PDB

Range: B:3-154
PDB: 2YYE chain B(all domains)
UniProt: O67139 (all domains)
Gene: selD

Molecule: Selenide, water dikinase

3D Structure

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Related Domains

Browse other domains in AIRS →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupPurM N-terminal domain-like(301.2)

TT-groupPurM N-terminal domain-like(301.2.1)

FFamilyAIRS(301.2.1.1)

Ligands

in contact, ≤ 4 Å

alpha,beta-Methyleneadenosine 5'-triphosphateAPC
drugDrugBank DB02596
COBALT (II) IONCO
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

AIR synthase related protein, N-terminal domain

ClanCL0804PurM_N-like

External Links

ECOD PDB View: 2YYE RCSB PDB: 2YYE PDBe: 2YYE UniProt: O67139

Downloads

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