ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vgfA1 - ECOD Domain | ECOD

ECOD/Domains/e1vgfA1

e1vgfA1

UID: 000079740

PDB

Range: A:5-198
PDB: 1VGF chain A(all domains)
UniProt: Q6USC4 (all domains)

Molecule: volvatoxin A2

3D Structure

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Related Domains

Browse other domains in Bac_thur_toxin →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytB endotoxin-like (Pfam 01338)(858)

HH-groupCytB endotoxin-like (Pfam 01338)(858.1)

TT-groupCytB endotoxin-like (Pfam 01338)(858.1.1)

FFamilyBac_thur_toxin(858.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01338Bac_thur_toxin

Bacillus thuringiensis toxin

ClanCL0968CytB-like

External Links

ECOD PDB View: 1VGF RCSB PDB: 1VGF PDBe: 1VGF UniProt: Q6USC4

Downloads

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