ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vqoZ1 - ECOD Domain | ECOD

ECOD/Domains/e1vqoZ1

e1vqoZ1

UID: 000008021

RepresentativePDB

Range: Z:10-82
PDB: 1VQO chain Z(all domains)
UniProt: P60619 (all domains)
Gene: rpl37ae

Molecule: 50S ribosomal protein L37Ae

3D Structure

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Related Domains

Browse other domains in Ribosomal_L37ae →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L37ae(375.1.1.13)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01780Ribosomal_L37ae

Ribosomal L37ae protein family

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 1VQO RCSB PDB: 1VQO PDBe: 1VQO UniProt: P60619

Downloads

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