ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jdbB2 - ECOD Domain | ECOD

ECOD/Domains/e1jdbB2

e1jdbB2

UID: 000080687

PDB

Range: B:128-401
PDB: 1JDB chain B(all domains)
UniProt: P00968 (all domains)
Gene: carB

Molecule: CARBAMOYL PHOSPHATE SYNTHETASE

3D Structure

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Related Domains

Browse other domains in CPSase_L_D2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyCPSase_L_D2(206.1.3.10)

Ligands

in contact, ≤ 4 Å

ADENOSINE-5'-DIPHOSPHATEADP
Chloride ionCL
Potassium ionK
metal
MANGANESE (II) IONMN
metal

+ 1 additive (Phosphate ion)

Phosphate ion

Pfam Families

PF02786CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 1JDB RCSB PDB: 1JDB PDBe: 1JDB UniProt: P00968

Downloads

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