ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1v5nA1 - ECOD Domain | ECOD

ECOD/Domains/e1v5nA1

e1v5nA1

UID: 000008118

RepresentativePDB

Range: A:1-89
PDB: 1V5N chain A(all domains)
UniProt: O80763 (all domains)
Gene: At1g60420

Molecule: PDI-like Hypothetical Protein At1g60420

3D Structure

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Related Domains

Browse other domains in C1_2 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupCysteine-rich domain(376.1.2)

FFamilyC1_2(376.1.2.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

C1 domain

ClanCL0229RING

External Links

ECOD PDB View: 1V5N RCSB PDB: 1V5N PDBe: 1V5N UniProt: O80763

Downloads

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