ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1khrE1 - ECOD Domain | ECOD

ECOD/Domains/e1khrE1

e1khrE1

UID: 000081223

PDB

Range: E:2-203
PDB: 1KHR chain E(all domains)
UniProt: P50870 (all domains)
Gene: vatD

Molecule: STREPTOGRAMIN A ACETYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in Hexapep →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyHexapep(208.1.1.1)

Ligands

in contact, ≤ 4 Å

Coenzyme ACOA
drugDrugBank DB01992
Virginiamycin M1VIR
drugDrugBank DB01669

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF00132Hexapep

Bacterial transferase hexapeptide (six repeats)

ClanCL0536HEXAPEP

External Links

ECOD PDB View: 1KHR RCSB PDB: 1KHR PDBe: 1KHR UniProt: P50870

Downloads

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