ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yp2B1 - ECOD Domain | ECOD

ECOD/Domains/e1yp2B1

e1yp2B1

UID: 000081260

PDB

Range: B:317-451
PDB: 1YP2 chain B(all domains)
UniProt: P23509 (all domains)

Molecule: Glucose-1-phosphate adenylyltransferase small subunit

3D Structure

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Related Domains

Browse other domains in LbH_GLGC →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyLbH_GLGC(208.1.1.19)

Ligands

in contact, ≤ 4 Å

Para-Mercury-Benzenesulfonic AcidPMB
drugDrugBank DB02983

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF25247LbH_GLGC

GLGC left-handed parallel beta-helix domain

ClanCL0536HEXAPEP

External Links

ECOD PDB View: 1YP2 RCSB PDB: 1YP2 PDBe: 1YP2 UniProt: P23509

Downloads

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Drug annotations from DrugDomain.