ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2pf5C1 - ECOD Domain | ECOD

ECOD/Domains/e2pf5C1

e2pf5C1

UID: 000081603

PDB

Range: C:1-95
PDB: 2PF5 chain C(all domains)
UniProt: P98066 (all domains)
Gene: TNFAIP6

Molecule: Tumor necrosis factor-inducible protein TSG-6

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyXlink(209.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Nonaethylene glycol)

Nonaethylene glycol2PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Extracellular link domain

ClanCL0056C_Lectin

External Links

ECOD PDB View: 2PF5 RCSB PDB: 2PF5 PDBe: 2PF5 UniProt: P98066

Downloads

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