ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1yxjB1 - ECOD Domain | ECOD

ECOD/Domains/e1yxjB1

e1yxjB1

UID: 000081939

PDB

Range: B:143-270
PDB: 1YXJ chain B(all domains)
UniProt: P78380 (all domains)
Gene: OLR1

Molecule: oxidised low density lipoprotein (lectin-like) receptor 1

3D Structure

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Related Domains

Browse other domains in Lectin_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyLectin_C(209.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00059Lectin_C

Lectin C-type domain

ClanCL0056C_Lectin

External Links

ECOD PDB View: 1YXJ RCSB PDB: 1YXJ PDBe: 1YXJ UniProt: P78380

Downloads

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