ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ogbA1 - ECOD Domain | ECOD

ECOD/Domains/e2ogbA1

e2ogbA1

UID: 000082346

PDB

Range: A:197-317
PDB: 2OGB chain A(all domains)
UniProt: Q8BH75 (all domains)
Gene: Rnf41

Molecule: RING finger protein 41

3D Structure

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Related Domains

Browse other domains in USP8_interact →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupUSP8 interacting domain(4347)

HH-groupUSP8 interacting domain(4347.1)

TT-groupUSP8 interacting domain(4347.1.1)

FFamilyUSP8_interact(4347.1.1.1)

Ligands

in contact, ≤ 4 Å

Thiocyanate ionSCN

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08941USP8_interact

USP8 interacting

External Links

ECOD PDB View: 2OGB RCSB PDB: 2OGB PDBe: 2OGB UniProt: Q8BH75

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