ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1y4hB1 - ECOD Domain | ECOD

ECOD/Domains/e1y4hB1

e1y4hB1

UID: 000082535

PDB

Range: B:221-393
PDB: 1Y4H chain B(all domains)
UniProt: P0C1S6 (all domains)
Gene: sspB

Molecule: cysteine protease

3D Structure

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Related Domains

Browse other domains in Peptidase_C47 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C47(219.1.1.34)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05543Peptidase_C47

Staphopain peptidase C47

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 1Y4H RCSB PDB: 1Y4H PDBe: 1Y4H UniProt: P0C1S6

Downloads

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