ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qolF1 - ECOD Domain | ECOD

ECOD/Domains/e1qolF1

e1qolF1

UID: 000082562

PDB

Range: F:29-184
PDB: 1QOL chain F(all domains)
UniProt: P03305 (all domains)

Molecule: PROTEASE (NONSTRUCTURAL PROTEIN P20A)

3D Structure

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Related Domains

Browse other domains in Peptidase_C28 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C28(219.1.1.30)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05408Peptidase_C28

Foot-and-mouth virus L-proteinase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 1QOL RCSB PDB: 1QOL PDBe: 1QOL UniProt: P03305

Downloads

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