ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qteA2 - ECOD Domain | ECOD

ECOD/Domains/e1qteA2

e1qteA2

UID: 000083829

PDB

Range: A:451-618
PDB: 1QTE chain A(all domains)
UniProt: P0AGC3 (all domains)
Gene: slt

Molecule: SOLUBLE LYTIC TRANSGLYCOSYLASE SLT70

3D Structure

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Related Domains

Browse other domains in SLT, SLT_superhelical →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilySLT, SLT_superhelical(235.1.1.32)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
D-AlanineDAL
drugDrugBank DB01786within 5 Å only

Pfam Families

Transglycosylase SLT domain

ClanCL0037Lysozyme

PF27553SLT_superhelical

Soluble lytic transglycosylase helical domain

External Links

ECOD PDB View: 1QTE RCSB PDB: 1QTE PDBe: 1QTE UniProt: P0AGC3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-(2-ACETYLAMINO-4-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCT-3-YLOXY)-PROPIONIC ACIDAH0

+ 2 additives (Glycerol, Sulfate ion)

GlycerolGOL
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.