ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1d0mA1 - ECOD Domain | ECOD

ECOD/Domains/e1d0mA1

e1d0mA1

UID: 000083830

PDB

Range: A:40-361
PDB: 1D0M chain A(all domains)
UniProt: P41052 (all domains)
Gene: mltB

Molecule: 35KD SOLUBLE LYTIC TRANSGLYCOSYLASE

3D Structure

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Related Domains

Browse other domains in SLT_2 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilySLT_2(235.1.1.19)

Ligands

in contact, ≤ 4 Å

(2R,3S,5S)-2-(Hydroxymethyl)-5-[(2-sulfoethyl)carbamoyl]-3-pyrrolidiniumyl 2-acetamido-2-deoxy-4-O-sulfo-beta-D-glucopyranosideBLG
drugDrugBank DB02595
Calcium ionCA
metal

Pfam Families

Transglycosylase SLT domain

ClanCL0037Lysozyme

External Links

ECOD PDB View: 1D0M RCSB PDB: 1D0M PDBe: 1D0M UniProt: P41052

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.