ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pvyA1 - ECOD Domain | ECOD

ECOD/Domains/e1pvyA1

e1pvyA1

UID: 000084894

PDB

Range: A:2-220
PDB: 1PVY chain A(all domains)
UniProt: Q60364 (all domains)
Gene: ribB

Molecule: 3,4-dihydroxy-2-butanone 4-phosphate synthase

3D Structure

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Related Domains

Browse other domains in DHBP_synthase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupYrdC/RibB(297)

HH-groupYrdC/RibB(297.1)

TT-groupYrdC/RibB(297.1.1)

FFamilyDHBP_synthase(297.1.1.1)

Ligands

in contact, ≤ 4 Å

RIBULOSE-5-PHOSPHATE5RP
Calcium ionCA
metal
Zinc ionZN

Pfam Families

PF00926DHBP_synthase

3,4-dihydroxy-2-butanone 4-phosphate synthase

External Links

ECOD PDB View: 1PVY RCSB PDB: 1PVY PDBe: 1PVY UniProt: Q60364

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.