ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1dsvA1 - ECOD Domain | ECOD

ECOD/Domains/e1dsvA1

e1dsvA1

UID: 000008569

RepresentativePDB

Range: A:54-84
PDB: 1DSV chain A(all domains)
UniProt: P11284 (all domains)
Gene: gag

Molecule: NUCLEIC ACID BINDING PROTEIN P14

3D Structure

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Related Domains

Browse other domains in zf-CCHC_5 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCCHC-type 1 zinc finger(396)

HH-groupRetrovirus zinc finger-related domains(396.1)

TT-groupRetrovirus zinc finger-related domains(396.1.1)

FFamilyzf-CCHC_5(396.1.1.4)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14787zf-CCHC_5

GAG-polyprotein viral zinc-finger

ClanCL0511Retroviral_zf

External Links

ECOD PDB View: 1DSV RCSB PDB: 1DSV PDBe: 1DSV UniProt: P11284

Downloads

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