ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dxjC4 - ECOD Domain | ECOD

ECOD/Domains/e3dxjC4

e3dxjC4

UID: 000085765

PDB

Range: C:1-141,C:331-456
PDB: 3DXJ chain C(all domains)
UniProt: Q8RQE9 (all domains)
Gene: rpoB

Molecule: BACTERIAL RNA POLYMERASE BETA SUBUNIT; CHAIN C, M

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010)

HH-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1)

TT-groupN-terminal domain in beta subunit of DNA dependent RNA-polymerase(4010.1.1)

FFamilyRNA_pol_Rpb2_1,RNA_pol_Rpb2_3(4010.1.1.2)

Pfam Families

PF04563RNA_pol_Rpb2_1

RNA polymerase beta subunit

PF04565RNA_pol_Rpb2_3

RNA polymerase Rpb2, domain 3

External Links

ECOD PDB View: 3DXJ RCSB PDB: 3DXJ PDBe: 3DXJ UniProt: Q8RQE9

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