ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1j0pA1 - ECOD Domain | ECOD

ECOD/Domains/e1j0pA1

e1j0pA1

UID: 000008634

RepresentativePDB

Range: A:0-107
PDB: 1J0P chain A(all domains)
UniProt: P00132 (all domains)
Gene: DvMF_2499

Molecule: Cytochrome c3

3D Structure

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Related Domains

Browse other domains in Cytochrom_CIII →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupMultiheme cytochromes(139)

HH-groupCytochrome c3-like(139.1)

TT-groupCytochrome c3-like(139.1.1)

FFamilyCytochrom_CIII(139.1.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267within 5 Å only

+ 2 additives (Ethanol, Sulfate ion)

EthanolEOH
DrugBank DB00898

Pfam Families

PF02085Cytochrom_CIII

Class III cytochrome C family

ClanCL0317Multiheme_cytos

External Links

ECOD PDB View: 1J0P RCSB PDB: 1J0P PDBe: 1J0P UniProt: P00132

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.