ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jmjB1 - ECOD Domain | ECOD

ECOD/Domains/e1jmjB1

e1jmjB1

UID: 000086479

PDB

Range: B:95-480
PDB: 1JMJ chain B(all domains)
UniProt: P05546 (all domains)
Gene: SERPIND1

Molecule: HEPARIN COFACTOR II

3D Structure

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Related Domains

Browse other domains in Serpin →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupSerpins(4059)

HH-groupSerpins(4059.1)

TT-groupSerpins(4059.1.1)

FFamilySerpin(4059.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Serpin (serine protease inhibitor)

External Links

ECOD PDB View: 1JMJ RCSB PDB: 1JMJ PDBe: 1JMJ UniProt: P05546

Downloads

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