ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r30A1 - ECOD Domain | ECOD

ECOD/Domains/e1r30A1

e1r30A1

UID: 000008659

RepresentativePDB

Range: A:4-315
PDB: 1R30 chain A(all domains)
UniProt: P12996 (all domains)
Gene: bioB

Molecule: Biotin synthase

3D Structure

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Related Domains

Browse other domains in Radical_SAM,BATS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM,BATS(2002.1.1.122)

Ligands

in contact, ≤ 4 Å

DethiobiotinDTB
drugDrugBank DB03775
AdemetionineSAM
drugDrugBank DB00118
FE2/S2 (INORGANIC) CLUSTER

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

Biotin and Thiamin Synthesis associated domain

External Links

ECOD PDB View: 1R30 RCSB PDB: 1R30 PDBe: 1R30 UniProt: P12996

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Iron/sulfur clusterSF4

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.